Make GNU Health SPOC-compatible

lxc-apps/gnuhealth/app

@@ -0,0 +1,26 @@
+{
+    "version": "3.6.3-200313",
+    "meta": {
+        "title": "GNU Health",
+        "desc-cs": "Lékařské záznamy pacientů",
+        "desc-en": "Medical records administration",
+        "license": "GPL"
+    },
+    "containers": {
+        "gnuhealth": {
+            "image": "gnuhealth_3.6.3-200313",
+            "depends": [
+                "gnuhealth-postgres"
+            ],
+            "mounts": {
+                "gnuhealth/gnuhealth_conf": "srv/gnuhealth/gnuhealth/tryton/server/config"
+            }
+        },
+        "gnuhealth-postgres": {
+            "image": "postgres_12.2.0-200313",
+            "mounts": {
+                "gnuhealth/postgres_data": "var/lib/postgresql"
+            }
+        }
+    }
+}

lxc-apps/gnuhealth/image

@@ -1,5 +1,5 @@
-IMAGE gnuhealth_3.4.1-190620
+IMAGE gnuhealth_3.6.3-200313
-FROM alpine3.9-python3.6_3.6.8-190620
+FROM alpine3.11-python3.8_3.8.2-200313
 
 RUN EOF
     # Install runtime dependencies
@@ -9,15 +9,8 @@ RUN EOF
     apk --no-cache add --virtual .deps build-base git libffi-dev libjpeg-turbo-dev libxml2-dev libxslt-dev ncurses npm patch postgresql-dev python3-dev sudo
 
     # Download GNU Health
-    wget http://ftp.gnu.org/gnu/health/gnuhealth-3.4.1.tar.gz -O /tmp/gnuhealth.tgz
+    wget http://ftp.gnu.org/gnu/health/gnuhealth-3.6.3.tar.gz -O - | tar xzf - -C /srv
-    tar xzf /tmp/gnuhealth.tgz -C /srv
+    mv /srv/gnuhealth-* /srv/install
-    mv /srv/gnuhealth-3.4.1 /srv/install
-
-    # Hackfix python-barcode support (will work in 3.4.2 - see http://hg.savannah.gnu.org/hgweb/health/rev/61b7bc7b1a78)
-    sed -i 's/pybarcode/python-barcode/' /srv/install/gnuhealth-setup
-
-    # Clone Sao (Tryton web client) repository
-    git clone -b 4.6 --single-branch --depth 1 https://github.com/tryton/sao /srv/gnuhealth/sao
 
     # Create OS user
     addgroup -S -g 8080 gnuhealth
@@ -31,11 +24,10 @@ RUN EOF
     # Create symlink for the current version of trytond
     ln -s /srv/gnuhealth/gnuhealth/tryton/server/trytond-* /srv/gnuhealth/gnuhealth/tryton/server/trytond-current
 
-    # Hackfix extraneous pymongo requirement
+    # Clone Sao (Tryton web client) repository
-    sed -i '/pymongo/d' /srv/gnuhealth/gnuhealth/tryton/server/modules/health_federation/health_federation.py
+    # Note: Sao version needs to be the same as Tryton version installed by GNU Health
-
+    git clone -b 5.0 --single-branch --depth 1 https://github.com/tryton/sao /srv/gnuhealth/sao
-    # Hackfix template1 database lock
+    chown -R gnuhealth:gnuhealth /srv/gnuhealth/sao
-    sed -i 's/template1/gnuhealth/g' /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/trytond/backend/postgresql/database.py
 
     # Install Sao (Tryton web client) dependencies
     cd /srv/gnuhealth/sao
@@ -43,18 +35,17 @@ RUN EOF
     sudo -u gnuhealth ./node_modules/grunt-cli/bin/grunt
 
     # Download Demo database
-    wget http://health.gnu.org/downloads/postgres_dumps/gnuhealth-34-demo.sql.gz -O /srv/gnuhealth/gnuhealth_demo.sql.gz
+    wget http://health.gnu.org/downloads/postgres_dumps/gnuhealth-36-demo.sql.gz -O /srv/gnuhealth/gnuhealth_demo.sql.gz
 
     # Cleanup
     apk --no-cache del .deps
     find /srv/gnuhealth -name '.git*' -exec rm -rf {} +
     rm -rf /srv/install
-    rm -f /tmp/gnuhealth.tgz
 EOF
 
 ENV PATH /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
 ENV TRYTOND_CONFIG /srv/gnuhealth/gnuhealth/tryton/server/config/trytond.conf
 ENV PYTHONPATH /srv/gnuhealth/gnuhealth/tryton/server/trytond-current:/srv/gnuhealth/gnuhealth/tryton/server/config
 
-USER 8080 8080
+USER gnuhealth
-CMD trytond --verbose
+CMD /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/bin/trytond --verbose

lxc-apps/gnuhealth/install.sh

@@ -1,38 +1,38 @@
 #!/bin/sh
 set -ev
 
+# Volumes
+POSTGRES_DATA="${VOLUMES_DIR}/gnuhealth/postgres_data"
+GNUHEALTH_CONF="${VOLUMES_DIR}/gnuhealth/gnuhealth_conf"
+
 # Create Postgres instance
-mkdir -p /srv/gnuhealth/postgres_data
+install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
-chown -R 105432:105432 /srv/gnuhealth/postgres_data
+spoc-container exec gnuhealth-postgres -- initdb -D /var/lib/postgresql
-chmod 700 /srv/gnuhealth/postgres_data
-lxc-execute -n gnuhealth-postgres -- initdb -D /var/lib/postgresql
 
 # Configure Postgres
-cp postgres_data/postgresql.conf /srv/gnuhealth/postgres_data/postgresql.conf
+install -o 105432 -g 105432 -m 600 postgres_data/postgresql.conf ${POSTGRES_DATA}/postgresql.conf
-cp postgres_data/pg_hba.conf /srv/gnuhealth/postgres_data/pg_hba.conf
+install -o 105432 -g 105432 -m 600 postgres_data/pg_hba.conf ${POSTGRES_DATA}/pg_hba.conf
 
 # Create databases
 export GNUHEALTH_PWD=$(head -c 18 /dev/urandom | base64 | tr -d '+/=')
-service lxc-gnuhealth-postgres start
+spoc-container start gnuhealth-postgres
-envsubst <createdb.sql | lxc-attach -u 5432 -g 5432 gnuhealth-postgres -- psql
+envsubst <createdb.sql | spoc-container exec gnuhealth-postgres -- psql
 
 # Configure GNU Health
-mkdir -p /srv/gnuhealth/gnuhealth_conf/
+install -o 108080 -g 108080 -m 750 -d ${GNUHEALTH_CONF}
-envsubst <gnuhealth_conf/trytond.conf >/srv/gnuhealth/gnuhealth_conf/trytond.conf
+envsubst <gnuhealth_conf/trytond.conf | install -o 108080 -g 108080 -m 640 /dev/stdin ${GNUHEALTH_CONF}/trytond.conf
 
 # Populate database
 export GNUHEALTH_ADMIN_USER="admin"
+export GNUHEALTH_ADMIN_EMAIL="admin@example.com"
 export GNUHEALTH_ADMIN_PWD=$(head -c 12 /dev/urandom | base64 | tr -d '+/=')
-lxc-execute gnuhealth -- sh -c "echo ${GNUHEALTH_ADMIN_PWD} >/tmp/.adminpwd; TRYTONPASSFILE=/tmp/.adminpwd trytond-admin -d gnuhealth --all -v; rm /tmp/.adminpwd"
+spoc-container exec gnuhealth -- sh -c "echo ${GNUHEALTH_ADMIN_PWD} >/tmp/.adminpwd; TRYTONPASSFILE=/tmp/.adminpwd trytond-admin -d gnuhealth --email ${GNUHEALTH_ADMIN_EMAIL} --all -v; rm /tmp/.adminpwd"
 
 # Populate demo database
-lxc-execute gnuhealth -- zcat /srv/gnuhealth/gnuhealth_demo.sql.gz | lxc-attach -u 5432 -g 5432 gnuhealth-postgres -- sh -c "PGPASSWORD=${GNUHEALTH_PWD} psql gnuhealth_demo gnuhealth"
+spoc-container exec gnuhealth -- zcat /srv/gnuhealth/gnuhealth_demo.sql.gz | spoc-container exec gnuhealth-postgres -- sh -c "PGPASSWORD=${GNUHEALTH_PWD} psql gnuhealth_demo gnuhealth"
-
-# Install config update script
-cp update-conf.sh /srv/gnuhealth/update-conf.sh
 
 # Stop services required for setup
-service lxc-gnuhealth-postgres stop
+spoc-container stop gnuhealth-postgres
 
 # Register application
 vmmgr register-app gnuhealth gh "${GNUHEALTH_ADMIN_USER}" "${GNUHEALTH_ADMIN_PWD}"

lxc-apps/gnuhealth/meta

@@ -1,26 +0,0 @@
-{
-    "version": "3.4.1-190620",
-    "meta": {
-        "title": "GNU Health",
-        "desc-cs": "Lékařské záznamy pacientů",
-        "desc-en": "Medical records administration",
-        "license": "GPL"
-    },
-    "containers": {
-        "gnuhealth": {
-            "image": "gnuhealth_3.4.1-190620",
-            "depends": [
-                "gnuhealth-postgres"
-            ],
-            "mounts": [
-                ["DIR", "/srv/gnuhealth/gnuhealth_conf", "/srv/gnuhealth/gnuhealth/tryton/server/config"]
-            ]
-        },
-        "gnuhealth-postgres": {
-            "image": "postgres_11.3.0-190620",
-            "mounts": [
-                ["DIR", "/srv/gnuhealth/postgres_data", "/var/lib/postgresql"]
-            ]
-        }
-    }
-}

lxc-apps/gnuhealth/uninstall.sh

@@ -2,7 +2,7 @@
 set -ev
 
 # Remove persistent data
-rm -rf /srv/gnuhealth
+rm -rf "${VOLUMES_DIR}/gnuhealth"
 
 # Unregister application
 vmmgr unregister-app gnuhealth